Last updated on May 20, 2013

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I. DNA amplification

Kit

GE:illustra GenomiPhi V2 DNA Amplification Kit

II. PCR

Primer details

Exon No. Forward sequence Reverse sequence Expected PCR
product size (bp)
Genomic regions amplified by
ePCR with the primer
 2-3   TCCAGCACTCCTTTCCATGC   CCTCGAAATGCAAGGAGATG    802     chr19:17954524-17955325 
 4-5   GAGGCCTCCGCAGAATCTG   CATAGGAACACCCTGAAAGC    683     chr19:17953716-17954398 
 6   TAAAGCCTGGGTTTGTGTGTG   TCATTAAGCCTCGCCCACTTC    503     chr19:17952997-17953499 
 7-8   GTGTTGAGAGGTTGGAGTTG   TTCACTGAGCGCTGACTGTG    676     chr19:17952053-17952728 
 9   GATCCCAGGGCTACAGAGGT   GGGGTGTCTTTTCCCTCCTA    327     chr19:17950921-17951247 
 10   AAAGGAAGAAGGACTGAGAAGG   ACCCACACAGGAGCTGTCAC    335     chr19:17950207-17950541 
 11   GTCTCAACAGCAGCAGCAAC   GTGAGGGGACAGCAGAAGAG    497     chr19:17948880-17949376 
 12   GGGCCAGCAGCTATGTCTC   TTTCTCTGCATCCACGACC    284     chr19:17948672-17948955 
 13   ATCATGGTAGTGCTGTGTGC   GCTGTCATATAGCGGCTCAG    329     chr19:17947848-17948176 
 14   TACAGATACAGACAGGGCTC   CGCCCTGACATCCAAGAATG    532     chr19:17946550-17947081 
 15   GAGAAGGGGAGGGACATAGC   AATCCCCAACCCAATAGACC    666     chr19:17945555-17946220 
 16-17   CCTTCATCAAGCTGAGTGACC   CTCCAACCTCACCAGACACA    675     chr19:17945271-17945945 
 18-19   CATAATGCACAGAGAGGGTC   TTCCCAGCCTACCTAAAGTG    620     chr19:17943231-17943850 
 20-21   AACTGAGGTCGAGAGGGACAC   CTAAGGCTGGGGAGCAAAG    774     chr19:17941935-17942708 
 22   GGGCTGGAGAATCCACCTAT   AAGGGGTCAGAAAGGTGAGG    447     chr19:17941150-17941596 
 23   ACCTGGTCCCAGCATCATAG   TGACTTGCCACACAGTGAGAG    460     chr19:17940751-17941210 
 24   TACGCTGAATGGGAGTTGTG   CTTAAGGGGTTGGGAAGATG    529     chr19:17937261-17937789 

III. Sequencing reaction

Kit

BigDye® Terminator v3.1 Cycle Sequencing Kit

Primer details

Exon No. Forward sequence Reverse sequence Expected PCR
product size (bp)
Genomic regions amplified by
ePCR with the primer
 Identical to the PCR Primer 

IV. Ethanol precipitation

V. Sequencing analysis

   

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