Last updated on May 20, 2013

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I. DNA amplification

Kit

GE:illustra GenomiPhi V2 DNA Amplification Kit

II. PCR

Primer details

Exon No. Forward sequence Reverse sequence Expected PCR
product size (bp)
Genomic regions amplified by
ePCR with the primer
 1   TTTGCTCTTTGCGTGGTCG   ACTTGTCATCAGGGACGCC    478     chr21:45705704+45706181 
 2   CACCTGACTCCACCACAAGC   AAGACGGTCCTGGAACATCAC    454     chr21:45706285+45706738 
 3-4   ACCTGTCTGGCCAAGGTGTC   AGACCCAAGGTGTCCCCTTC    885     chr21:45706769+45707653 
 5   TTCCTATCCATTGTGCCAGC   CAAGGACGCTATGCTACAGG    760     chr21:45707966+45708725 
 6-7   TGTTGAACACCCTGGTGTAG   GACCTCACTTTCTCTGACTC    814     chr21:45709349+45710162 
 8a   CACCAGGTAATGCCCTAGAC   CCACATGAACCCTTCCTCAC    750     chr21:45709946+45710695 
 8b   AATGAGTGAGGTCATTGCCG   TTCTGCTTTGCTGCCCTCAG    859     chr21:45710476+45711334 
 9   GGATTCCTGGGGTTCATCAG   GCACAGTAGACCTACTACCC    670     chr21:45711936+45712605 
 10   GGACCACAGAGCCAGGAAG   GCTGGAGTGGAGGTCTAGGAG    572     chr21:45712677+45713248 
 11   CCTCACTTGCGCCTAGACC   TGGGCTGTATGATGTGGGTG    338     chr21:45713544+45713881 
 12   ATACCCCGGAGGTGGCACT   AGGACAGGAAGAGCTACTGG    643     chr21:45714221+45714863 
 13   ACACAGTGTGGAGGCTGTCTG   AGGTGCTCAGCAGCACTGG    474     chr21:45716026+45716499* 
 14   CGATGGCCATGATTCTGTG   ACTTCCATGAGGTCCCTGG    783     chr21:45717470+45718252 
* Multiple genomic regions amplified

III. Sequencing reaction

Kit

BigDye® Terminator v3.1 Cycle Sequencing Kit

Primer details

Exon No. Forward sequence Reverse sequence Expected PCR
product size (bp)
Genomic regions amplified by
ePCR with the primer
 Identical to the PCR Primer 

IV. Ethanol precipitation

V. Sequencing analysis

   

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